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A proposed stepwise screening framework for the selection of polycyclic aromatic hydrocarbon (PAH)-degrading white rot fungi.

Identifieur interne : 000184 ( Main/Exploration ); précédent : 000183; suivant : 000185

A proposed stepwise screening framework for the selection of polycyclic aromatic hydrocarbon (PAH)-degrading white rot fungi.

Auteurs : Aslan Hwanhwi Lee [Corée du Sud, Canada] ; Hanbyul Lee [Corée du Sud] ; Young Mok Heo [Corée du Sud] ; Young Woon Lim [Corée du Sud] ; Chang-Mu Kim [Corée du Sud] ; Gyu-Hyeok Kim [Corée du Sud] ; Wonjae Chang [Canada] ; Jae-Jin Kim [Corée du Sud]

Source :

RBID : pubmed:31938872

Abstract

This study suggests a simple three-step screening protocol for the selection of white rot fungi (WRF) capable of degrading polycyclic aromatic hydrocarbons (PAHs), which combines easily applicable bioassay techniques, and verifies that protocol by evaluating the PAH degradation activity, ligninolytic enzyme secretion, and relevant gene expressions of the selected PAH-degraders. Using 120 fungal strains, a sequence of bioassay techniques was applied: Bavendamm's reaction (Step 1), remazol brilliant blue R (RBBR) decolorization (Step 2); assays for tolerance to four mixed PAHs-phenanthrene, anthracene, fluoranthene, and pyrene (Step 3). This stepwise protocol selected 14 PAH-degrading WRF, including Microporus vernicipes, Peniophora incarnata, Perenniporia subacida, Phanerochaete sordida, Phlebia acerina, and Phlebia radiata. Of these, P. incarnata exhibited the highest PAH degradative activity, ranging from 40 to > 90%, which was related to the time-variable secretions of three extracellular ligninolytic enzymes: laccase, manganese-dependent peroxidase (MnP) and lignin peroxidase (LiP). Laccase and MnP production by P. incarnata tended to be greater in the early stages of PAH degradation, whereas its LiP production became intensified with decreasing laccase and MnP production. Pilc1 and pimp1 genes encoding laccase and MnP were expressed, indicating the occurrence of extracellular enzyme-driven biodegradation of PAH by the fungal strains.

DOI: 10.1007/s00449-019-02272-w
PubMed: 31938872


Affiliations:


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<div type="abstract" xml:lang="en">This study suggests a simple three-step screening protocol for the selection of white rot fungi (WRF) capable of degrading polycyclic aromatic hydrocarbons (PAHs), which combines easily applicable bioassay techniques, and verifies that protocol by evaluating the PAH degradation activity, ligninolytic enzyme secretion, and relevant gene expressions of the selected PAH-degraders. Using 120 fungal strains, a sequence of bioassay techniques was applied: Bavendamm's reaction (Step 1), remazol brilliant blue R (RBBR) decolorization (Step 2); assays for tolerance to four mixed PAHs-phenanthrene, anthracene, fluoranthene, and pyrene (Step 3). This stepwise protocol selected 14 PAH-degrading WRF, including Microporus vernicipes, Peniophora incarnata, Perenniporia subacida, Phanerochaete sordida, Phlebia acerina, and Phlebia radiata. Of these, P. incarnata exhibited the highest PAH degradative activity, ranging from 40 to > 90%, which was related to the time-variable secretions of three extracellular ligninolytic enzymes: laccase, manganese-dependent peroxidase (MnP) and lignin peroxidase (LiP). Laccase and MnP production by P. incarnata tended to be greater in the early stages of PAH degradation, whereas its LiP production became intensified with decreasing laccase and MnP production. Pilc1 and pimp1 genes encoding laccase and MnP were expressed, indicating the occurrence of extracellular enzyme-driven biodegradation of PAH by the fungal strains.</div>
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<ArticleId IdType="pii">10.1007/s00449-019-02272-w</ArticleId>
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<li>Canada</li>
<li>Corée du Sud</li>
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<li>Séoul</li>
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<orgName>
<li>Université nationale de Séoul</li>
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<country name="Corée du Sud">
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<name sortKey="Lee, Aslan Hwanhwi" sort="Lee, Aslan Hwanhwi" uniqKey="Lee A" first="Aslan Hwanhwi" last="Lee">Aslan Hwanhwi Lee</name>
</noRegion>
<name sortKey="Heo, Young Mok" sort="Heo, Young Mok" uniqKey="Heo Y" first="Young Mok" last="Heo">Young Mok Heo</name>
<name sortKey="Kim, Chang Mu" sort="Kim, Chang Mu" uniqKey="Kim C" first="Chang-Mu" last="Kim">Chang-Mu Kim</name>
<name sortKey="Kim, Gyu Hyeok" sort="Kim, Gyu Hyeok" uniqKey="Kim G" first="Gyu-Hyeok" last="Kim">Gyu-Hyeok Kim</name>
<name sortKey="Kim, Jae Jin" sort="Kim, Jae Jin" uniqKey="Kim J" first="Jae-Jin" last="Kim">Jae-Jin Kim</name>
<name sortKey="Lee, Aslan Hwanhwi" sort="Lee, Aslan Hwanhwi" uniqKey="Lee A" first="Aslan Hwanhwi" last="Lee">Aslan Hwanhwi Lee</name>
<name sortKey="Lee, Hanbyul" sort="Lee, Hanbyul" uniqKey="Lee H" first="Hanbyul" last="Lee">Hanbyul Lee</name>
<name sortKey="Lim, Young Woon" sort="Lim, Young Woon" uniqKey="Lim Y" first="Young Woon" last="Lim">Young Woon Lim</name>
</country>
<country name="Canada">
<noRegion>
<name sortKey="Lee, Aslan Hwanhwi" sort="Lee, Aslan Hwanhwi" uniqKey="Lee A" first="Aslan Hwanhwi" last="Lee">Aslan Hwanhwi Lee</name>
</noRegion>
<name sortKey="Chang, Wonjae" sort="Chang, Wonjae" uniqKey="Chang W" first="Wonjae" last="Chang">Wonjae Chang</name>
</country>
</tree>
</affiliations>
</record>

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